C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405292 HNRNPA1P19-001 ENSG00000218454 9606 - 17:20771058-20771427 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryTestisENST00000405292
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Testis
ENST00000405292 0.088±0.00 0.191±0.00 0.099±0.00 0.098±0.00 0.045±0.00 0.130±0.00 0.048±0.00 0.042±0.00 0.083±0.02 0.132±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 431
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 431
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 425
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 198
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 3.9937e-43 178
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0.0000000000004 79

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