C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12458
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119387 Gm12458-001 ENSMUSG00000081120 10090 - 4:50050909-50051403 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaENSMUST00000119387
Transcript ID Brain Liver Muscle Ovary Placenta
ENSMUST00000119387 0.049±0.00 0.130±0.00 0.086±0.00 0.217±0.01 0.462±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QJ CIL_0001QJ_0002 CGP 4:49678747-51230272

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 0 540
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 0 540
ENST00000342073 HNRNPA1P61-001 processed_pseudogene Homo_sapiens 0 425
ENST00000357495 HNRNPA1L2-001 protein_coding Homo_sapiens 0 518
ENST00000391992 HNRNPA1P34-001 processed_pseudogene Homo_sapiens 0 399
ENST00000394002 HNRNPA1P6-001 unprocessed_pseudogene Homo_sapiens 0 427
ENST00000397777 HNRNPA1P41-001 processed_pseudogene Homo_sapiens 0 418
ENST00000405292 HNRNPA1P19-001 processed_pseudogene Homo_sapiens 0 318
ENST00000411674 HNRNPA1P64-001 processed_pseudogene Homo_sapiens 0 468
ENST00000411857 HNRNPA1P54-001 processed_pseudogene Homo_sapiens 0 424
ENST00000416539 HNRNPA1P66-001 processed_pseudogene Homo_sapiens 0 385
ENST00000420836 HNRNPA1P70-001 processed_pseudogene Homo_sapiens 0 340
ENST00000424115 HNRNPA1P21-001 processed_pseudogene Homo_sapiens 0 448
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 0 475
ENST00000427917 HNRNPA1P63-001 processed_pseudogene Homo_sapiens 0 455
ENST00000429216 HNRNPA1P35-001 processed_pseudogene Homo_sapiens 0 518
ENST00000430583 HNRNPA1P59-001 processed_pseudogene Homo_sapiens 0 444
ENST00000436090 HNRNPA1P8-001 processed_pseudogene Homo_sapiens 0 545
ENST00000440214 AC108039.3-001 processed_pseudogene Homo_sapiens 0 285
ENST00000440352 HNRNPA1P14-001 processed_pseudogene Homo_sapiens 0 451
ENST00000440699 HNRNPA1P30-001 transcribed_processed_pseudogene Homo_sapiens 0 366
ENST00000441603 HNRNPA1P53-001 processed_pseudogene Homo_sapiens 0 409
ENST00000444886 HNRNPA1P15-001 processed_pseudogene Homo_sapiens 0 431
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 0 529
ENST00000446472 HNRNPA1P73-001 processed_pseudogene Homo_sapiens 0 355
ENST00000450405 HNRNPA1P51-001 processed_pseudogene Homo_sapiens 0 490
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 0 499
ENST00000457695 HNRNPA1P26-001 processed_pseudogene Homo_sapiens 0 448
ENST00000458678 HNRNPA1P42-001 processed_pseudogene Homo_sapiens 0 440
ENST00000491091 HNRNPA1P23-001 processed_pseudogene Homo_sapiens 0 387
ENST00000505935 HNRNPA1P55-001 processed_pseudogene Homo_sapiens 0 438
ENST00000508873 HNRNPA1P65-001 processed_pseudogene Homo_sapiens 0 377
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 0 346
ENST00000510646 HNRNPA1P13-001 processed_pseudogene Homo_sapiens 0 448
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 0 484
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 0 540
ENST00000521313 HNRNPA1P36-001 processed_pseudogene Homo_sapiens 0 440
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 0 540
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 0 540
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000547708 HNRNPA1-015 protein_coding Homo_sapiens 0 335
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 0 448
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 0 523
ENST00000550994 HNRNPA1-014 protein_coding Homo_sapiens 0 473
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 0 278
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 0 534
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 0 534
ENST00000580106 HNRNPA1P11-001 processed_pseudogene Homo_sapiens 0 407
ENST00000604027 HNRNPA1P67-001 processed_pseudogene Homo_sapiens 0 363

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