C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: metastasis associated 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176816 Mta3-007 ENSMUSG00000055817 10090 + 17:83755634-83800240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryPlacentaTestisENSMUST00000176816
Transcript ID Adrenal Ovary Placenta Testis
ENSMUST00000176816 16.957±2.57 18.197±9.24 183.275±13.77 6.709±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TA CIL_0003TA_0003 CGP 17:83585957-83821516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008278 IDA cohesin complex
GO:0008284 IMP positive regulation of cell proliferation
GO:0010971 IMP positive regulation of G2/M transition of mitotic cell cycle
GO:0016581 IDA NuRD complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331320 MTA1-001 protein_coding Homo_sapiens 0 351
ENST00000405094 MTA3-017 protein_coding Homo_sapiens 0 676
ENST00000405592 MTA3-005 protein_coding Homo_sapiens 0 691
ENST00000405646 MTA1-003 protein_coding Homo_sapiens 0 351
ENST00000406191 MTA1-002 protein_coding Homo_sapiens 0 351
ENST00000406652 MTA3-001 protein_coding Homo_sapiens 0 691
ENST00000406911 MTA3-003 protein_coding Homo_sapiens 0 691
ENST00000407270 MTA3-002 protein_coding Homo_sapiens 0 676
ENST00000409019 MTA3-018 nonsense_mediated_decay Homo_sapiens 0 691
ENST00000430763 MTA3-010 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000434050 MTA1-007 protein_coding Homo_sapiens 0 350
ENST00000435036 MTA1-201 protein_coding Homo_sapiens 0 351
ENST00000438610 MTA1-004 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000454356 MTA3-004 nonsense_mediated_decay Homo_sapiens 0 691
ENST00000461256 MTA3-009 processed_transcript Homo_sapiens 0 202
ENST00000472767 MTA3-014 processed_transcript Homo_sapiens 6e-39 165
ENST00000475383 MTA3-015 processed_transcript Homo_sapiens 1e-39 167
ENST00000481012 MTA1-009 retained_intron Homo_sapiens 0 268
ENST00000484780 MTA3-008 processed_transcript Homo_sapiens 0 193
ENST00000498644 MTA1-017 protein_coding Homo_sapiens 0 220

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