C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003T7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054903-ENSDARG00000087084 CGP 7955 12:26751451-26822421
GeneTranscriptPositionBiotype
ENSDARG00000054903 (mta3)
metastasis associated 1 family, member 3 		ENSDART00000077180 (mta3-002) 26751495-26794781 protein_coding
ENSDART00000122665 (mta3-004) 26751525-26812162 protein_coding
ENSDART00000127454 (mta3-001) 26751525-26794783 protein_coding
ENSDART00000139362 (mta3-003) 26751451-26779439 processed_transcript
ENSDARG00000087084 (hcar1-4)
hydroxycarboxylic acid receptor 1-4 		ENSDART00000121736 (hcar1-4-201) 26820810-26821748 protein_coding
ENSDART00000153306 (hcar1-4-001) 26820528-26822421 protein_coding
CIL_0003T7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000057935-ENSG00000162881 CGP 9606 2:42494569-42764261
GeneTranscriptPositionBiotype
ENSG00000057935 (MTA3)
metastasis associated 1 family, member 3 		ENST00000405094 (MTA3-017) 42568746-42753399 protein_coding
ENST00000405592 (MTA3-005) 42494569-42756947 protein_coding
ENST00000406652 (MTA3-001) 42568045-42756947 protein_coding
ENST00000406911 (MTA3-003) 42568675-42709544 protein_coding
ENST00000407270 (MTA3-002) 42568517-42709544 protein_coding
ENST00000409019 (MTA3-018) 42568738-42754060 nonsense_mediated_decay
ENST00000430763 (MTA3-010) 42568741-42659789 nonsense_mediated_decay
ENST00000433553 (MTA3-011) 42569384-42609488 protein_coding
ENST00000454356 (MTA3-004) 42568675-42709213 nonsense_mediated_decay
ENST00000461256 (MTA3-009) 42568168-42659776 processed_transcript
ENST00000467925 (MTA3-006) 42703649-42753848 retained_intron
ENST00000472767 (MTA3-014) 42695765-42709153 processed_transcript
ENST00000475383 (MTA3-015) 42695765-42709211 processed_transcript
ENST00000478602 (MTA3-016) 42709075-42723334 retained_intron
ENST00000482875 (MTA3-007) 42702307-42709213 retained_intron
ENST00000484780 (MTA3-008) 42568111-42656302 processed_transcript
ENST00000490611 (MTA3-013) 42659520-42682706 retained_intron
ENST00000491314 (MTA3-019) 42613675-42644245 processed_transcript
ENST00000493983 (MTA3-012) 42570437-42656205 processed_transcript
ENSG00000162881 (OXER1)
oxoeicosanoid (OXE) receptor 1 		ENST00000378661 (OXER1-001) 42762481-42764261 protein_coding
ENSG00000200550 (RNU6-137P)
RNA, U6 small nuclear 137, pseudogene 		ENST00000363680 (RNU6-137P-201) 42712740-42712847 snRNA
ENSG00000215263 (AC025750.7)
 ENST00000399891 (AC025750.7-001) 42532766-42533442 processed_pseudogene
ENSG00000226523 (AC074375.1)
 ENST00000372993 (AC074375.1-001) 42680088-42680279 processed_pseudogene
ENSG00000273913 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000611671 (Metazoa_SRP.1-251) 42511570-42511851 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003T7_0001ENSDARG00000054903ENSDART00000077180ENSDART00000122665ENSDART00000127454ENSDART00000139362ENSDARG00000087084ENSDART00000121736ENSDART00000153306CIL_0003T7_0002ENSG00000057935ENST00000405094ENST00000405592ENST00000406652ENST00000406911ENST00000407270ENST00000409019ENST00000430763ENST00000433553ENST00000454356ENST00000461256ENST00000467925ENST00000472767ENST00000475383ENST00000478602ENST00000482875ENST00000484780ENST00000490611ENST00000491314ENST00000493983ENSG00000162881ENST00000378661ENSG00000200550ENST00000363680ENSG00000215263ENST00000399891ENSG00000226523ENST00000372993ENSG00000273913ENST00000611671
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003T7_0001ENSDARG00000054903ENSDART00000077180ENSDART00000122665ENSDART00000127454ENSDART00000139362ENSDARG00000087084ENSDART00000121736ENSDART00000153306CIL_0003T7_0002ENSG00000057935ENST00000405094ENST00000405592ENST00000406652ENST00000406911ENST00000407270ENST00000409019ENST00000454356ENST00000467925ENST00000472767ENST00000475383ENST00000478602ENST00000482875ENST00000493983ENSG00000162881ENST00000378661ENSG00000200550ENST00000363680ENSG00000215263ENST00000399891ENSG00000226523ENST00000372993ENSG00000273913ENST00000611671
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054903 ENSDART00000077180 N/A N/A N/A N/A N/A N/A 11.434±9.86 N/A 1.146±0.00 N/A 2.114±0.00 N/A N/A N/A
ENSDART00000122665 N/A N/A N/A N/A N/A N/A N/A 0.347±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000127454 N/A N/A N/A 3.381±0.00 N/A N/A 5.776±1.61 3.165±3.12 N/A N/A 1.572±0.00 N/A N/A N/A
ENSDART00000139362 N/A N/A N/A N/A N/A N/A N/A 9.647±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000087084 ENSDART00000121736 N/A N/A N/A 0.550±0.00 N/A N/A 4.327±0.00 N/A 2.719±0.00 N/A 1.645±0.00 N/A N/A N/A
ENSDART00000153306 N/A N/A N/A 0.114±0.01 N/A N/A 3.844±1.74 11.009±0.39 2.321±0.00 N/A 1.550±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000057935 ENST00000405094 1.743±0.00 N/A N/A 7.613±0.00 1.821±0.20 2.688±0.84 1.405±0.61 0.759±0.00 2.188±0.00 N/A 0.730±0.00 7.235±1.66 4.169±0.68 9.076±2.64
ENST00000405592 N/A 0.503±0.00 N/A 3.279±0.69 N/A N/A N/A N/A N/A 0.867±0.00 N/A 0.925±0.00 N/A 1.831±0.00
ENST00000406652 N/A 1.452±0.00 0.319±0.00 7.199±0.00 N/A 1.927±1.40 N/A N/A 0.557±0.28 1.523±0.00 N/A 6.303±0.80 0.712±0.00 2.489±0.00
ENST00000406911 N/A N/A N/A N/A 1.391±0.01 1.994±0.00 N/A N/A N/A 1.270±0.00 N/A N/A 2.729±0.07 N/A
ENST00000407270 N/A N/A 0.503±0.00 N/A N/A 2.067±0.00 N/A 1.456±0.00 0.529±0.00 N/A 0.760±0.00 5.142±1.39 N/A 4.120±0.00
ENST00000409019 N/A N/A N/A N/A 0.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454356 3.294±0.00 1.710±0.00 N/A N/A 2.272±0.00 2.158±0.00 2.796±0.00 3.408±1.68 1.491±0.00 2.584±0.00 N/A 27.204±22.65 10.031±9.91 26.326±15.42
ENST00000461256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467925 N/A N/A N/A N/A N/A N/A N/A 0.893±0.00 N/A N/A 1.622±0.00 N/A N/A N/A
ENST00000472767 N/A N/A N/A N/A N/A N/A N/A N/A 1.961±0.00 N/A N/A N/A N/A N/A
ENST00000475383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.918±0.00 N/A N/A N/A
ENST00000478602 N/A N/A N/A N/A N/A N/A 2.161±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000482875 N/A N/A N/A N/A 1.496±0.00 N/A N/A N/A N/A N/A N/A 2.127±0.00 N/A N/A
ENST00000484780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493983 N/A N/A N/A N/A N/A N/A 3.966±0.00 N/A 8.173±0.00 N/A N/A 44.099±0.00 31.486±0.00 44.488±0.00
ENSG00000162881 ENST00000378661 0.412±0.00 1.685±0.00 1.745±0.00 0.109±0.03 0.676±0.52 1.122±0.38 0.123±0.04 1.643±0.00 2.620±2.29 0.358±0.29 0.228±0.00 2.814±1.62 1.393±0.60 1.086±0.48
ENSG00000200550 ENST00000363680 1.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.493±0.00 N/A N/A
ENSG00000215263 ENST00000399891 N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226523 ENST00000372993 N/A N/A N/A N/A 1.307±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273913 ENST00000611671 0.150±0.00 0.528±0.00 0.705±0.00 0.634±0.00 0.080±0.00 0.147±0.00 0.152±0.00 0.167±0.00 N/A N/A N/A 1.072±0.73 0.282±0.06 0.499±0.15

Loading