C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COP9 signalosome subunit 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409334 COPS8-008 ENSG00000198612 9606 + 2:237085884-237097933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverLungMuscleOvaryTestisENST00000409334
Transcript ID Breast Heart Liver Lung Muscle Ovary Testis
ENST00000409334 3.350±0.00 2.821±0.00 2.052±0.00 3.194±0.00 4.691±0.00 3.390±0.00 15.408±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XT CIL_0000XT_0001 CGP 2:236567787-237100466
CIL_0008L9 CIL_0008L9_0001 VISTA 2:237013177-237616630
CIL_0000XQ CIL_0000XQ_0001 CGP 2:237085312-237414375

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036153 Cops8-001 protein_coding Mus_musculus 0 496
ENSMUST00000189309 Cops8-004 retained_intron Mus_musculus 0 483
ENSMUST00000186750 Cops8-008 protein_coding Mus_musculus 0 259
ENSMUST00000191510 Cops8-002 retained_intron Mus_musculus 0 259

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