C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000XT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144476-ENSG00000198612 CGP 9606 2:236567787-237100466
GeneTranscriptPositionBiotype
ENSG00000124835 (AC105760.3)
 ENST00000244820 (AC105760.3-001) 237048599-237056167 antisense
ENSG00000144476 (ACKR3)
atypical chemokine receptor 3 		ENST00000272928 (ACKR3-001) 236569641-236582358 protein_coding
ENST00000447924 (ACKR3-002) 236567787-236581097 protein_coding
ENSG00000198612 (COPS8)
COP9 signalosome subunit 8 		ENST00000354371 (COPS8-001) 237085312-237100466 protein_coding
ENST00000392008 (COPS8-002) 237085882-237098618 protein_coding
ENST00000409334 (COPS8-008) 237085884-237097933 protein_coding
ENST00000419015 (COPS8-005) 237085909-237094186 nonsense_mediated_decay
ENST00000447464 (COPS8-007) 237094139-237099143 nonsense_mediated_decay
ENST00000465362 (COPS8-006) 237096678-237098160 retained_intron
ENST00000470452 (COPS8-003) 237085886-237095881 retained_intron
ENSG00000227252 (AC105760.2)
 ENST00000418430 (AC105760.2-001) 237059434-237085817 antisense
ENSG00000232328 (AC011286.1)
 ENST00000413385 (AC011286.1-002) 236752774-236754363 lincRNA
ENST00000455068 (AC011286.1-001) 236733382-236752806 lincRNA
CIL_0000XT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044337-ENSMUSG00000034432 CGP 10090 1:90203980-90613341
GeneTranscriptPositionBiotype
ENSMUSG00000034432 (Cops8)
COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana) 		ENSMUST00000036153 (Cops8-001) 90602981-90613341 protein_coding
ENSMUST00000186152 (Cops8-009) 90603499-90611037 processed_transcript
ENSMUST00000186750 (Cops8-008) 90603528-90612180 protein_coding
ENSMUST00000186882 (Cops8-007) 90611580-90612622 protein_coding
ENSMUST00000189107 (Cops8-006) 90611346-90612393 retained_intron
ENSMUST00000189309 (Cops8-004) 90603478-90611466 retained_intron
ENSMUST00000190057 (Cops8-003) 90603499-90605658 retained_intron
ENSMUST00000190700 (Cops8-005) 90609654-90611328 retained_intron
ENSMUST00000191510 (Cops8-002) 90603476-90613124 retained_intron
ENSMUSG00000044337 (Ackr3)
atypical chemokine receptor 3 		ENSMUST00000065587 (Ackr3-001) 90203980-90216751 protein_coding
ENSMUST00000159654 (Ackr3-002) 90204006-90213833 protein_coding
ENSMUSG00000101028 (RP24-548K2.3)
predicted gene 28723 		ENSMUST00000188640 (RP24-548K2.3-001) 90280458-90283912 lincRNA
ENSMUSG00000101951 (RP24-548K2.2)
predicted gene 28721 		ENSMUST00000187649 (RP24-548K2.2-001) 90255276-90260120 lincRNA
ENSMUSG00000101997 (RP24-154L11.1)
predicted gene 28722 		ENSMUST00000187630 (RP24-154L11.1-001) 90453394-90454501 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XT_0001ENSG00000124835ENST00000244820ENSG00000144476ENST00000272928ENST00000447924ENSG00000198612ENST00000354371ENST00000392008ENST00000409334ENST00000419015ENST00000447464ENST00000465362ENST00000470452ENSG00000227252ENST00000418430ENSG00000232328ENST00000413385ENST00000455068CIL_0000XT_0002ENSMUSG00000034432ENSMUST00000036153ENSMUST00000186152ENSMUST00000186750ENSMUST00000186882ENSMUST00000189107ENSMUST00000189309ENSMUST00000190057ENSMUST00000190700ENSMUST00000191510ENSMUSG00000044337ENSMUST00000065587ENSMUST00000159654ENSMUSG00000101028ENSMUST00000188640ENSMUSG00000101951ENSMUST00000187649ENSMUSG00000101997ENSMUST00000187630
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XT_0001ENSG00000124835ENST00000244820ENSG00000144476ENST00000272928ENST00000447924ENSG00000198612ENST00000354371ENST00000392008ENST00000409334ENST00000470452ENSG00000227252ENST00000418430ENSG00000232328ENST00000413385ENST00000455068CIL_0000XT_0002ENSMUSG00000034432ENSMUST00000036153ENSMUST00000186750ENSMUST00000186882ENSMUST00000189309ENSMUST00000191510ENSMUSG00000044337ENSMUST00000065587ENSMUSG00000101028ENSMUST00000188640ENSMUSG00000101951ENSMUST00000187649ENSMUSG00000101997ENSMUST00000187630
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124835 ENST00000244820 0.005±0.00 0.026±0.00 N/A 0.013±0.00 0.011±0.00 0.055±0.00 N/A 0.120±0.00 0.051±0.00 0.317±0.00 N/A N/A N/A 0.016±0.00
ENSG00000144476 ENST00000272928 10.976±0.00 4.465±0.00 0.227±0.00 0.423±0.32 5.226±2.39 4.895±3.72 1.496±0.09 0.879±0.00 2.280±0.65 2.848±1.27 2.584±1.70 1.399±0.80 13.917±1.47 2.070±0.00
ENST00000447924 26.166±0.00 15.772±0.00 0.132±0.00 2.755±1.47 13.134±11.88 10.232±6.96 2.703±2.19 3.640±0.00 5.547±0.00 5.549±4.70 3.988±0.00 4.343±1.58 17.780±4.86 7.505±0.05
ENSG00000198612 ENST00000354371 1.005±0.00 N/A 0.703±0.00 2.972±1.23 N/A 0.851±0.49 0.450±0.00 1.295±0.41 0.725±0.35 1.048±0.18 N/A 1.668±0.00 1.268±0.00 N/A
ENST00000392008 12.223±0.00 11.398±0.00 N/A 18.048±6.03 7.641±5.30 8.996±7.35 13.257±10.84 9.700±8.04 3.959±1.93 7.247±5.62 16.953±12.22 15.281±9.16 23.611±3.87 30.327±1.62
ENST00000409334 N/A N/A N/A N/A 3.350±0.00 N/A 2.821±0.00 N/A 2.052±0.00 3.194±0.00 4.691±0.00 3.390±0.00 N/A 15.408±0.00
ENST00000419015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470452 N/A N/A N/A N/A N/A N/A N/A 1.056±0.00 N/A N/A N/A 6.509±0.00 N/A N/A
ENSG00000227252 ENST00000418430 N/A N/A 0.944±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232328 ENST00000413385 0.045±0.00 N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A 0.028±0.00
ENST00000455068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.130±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034432 ENSMUST00000036153 25.333±4.61 N/A 31.834±3.55 29.731±12.28 17.384±8.40 N/A 27.383±2.98 15.615±5.20 14.459±8.46 12.415±2.05 33.805±1.10 11.681±9.51 15.914±6.98 20.641±9.25
ENSMUST00000186152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186750 N/A N/A N/A 49.567±0.00 N/A N/A N/A N/A N/A N/A N/A 33.237±0.00 31.117±5.66 17.667±0.00
ENSMUST00000186882 N/A N/A N/A 45.017±0.00 28.785±0.00 N/A N/A N/A N/A N/A N/A 39.618±1.64 39.080±8.56 10.750±0.00
ENSMUST00000189107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189309 8.275±0.00 6.492±0.72 N/A N/A 9.779±2.36 6.413±0.51 N/A N/A 3.492±0.62 10.497±1.36 N/A 12.551±2.82 7.455±1.00 2.645±0.00
ENSMUST00000190057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191510 6.850±2.99 19.765±1.28 N/A N/A 14.360±6.71 9.328±3.55 N/A 17.300±0.00 8.209±3.03 15.754±5.06 N/A 19.734±4.88 N/A 0.879±0.00
ENSMUSG00000044337 ENSMUST00000065587 84.033±34.12 162.011±11.25 28.421±0.00 14.001±11.99 81.603±20.14 29.701±5.94 84.359±20.51 67.642±18.36 1.945±0.91 39.028±5.30 2.659±1.68 47.409±23.78 10.237±6.04 4.173±2.17
ENSMUST00000159654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000101028 ENSMUST00000188640 0.072±0.03 0.126±0.03 0.466±0.08 0.049±0.00 0.110±0.02 0.084±0.00 0.314±0.08 0.089±0.05 0.059±0.02 N/A 0.088±0.00 0.096±0.04 0.092±0.05 0.073±0.01
ENSMUSG00000101951 ENSMUST00000187649 0.037±0.00 0.096±0.00 0.095±0.00 0.018±0.00 N/A N/A N/A N/A N/A 0.048±0.00 N/A 0.126±0.08 0.064±0.06 N/A
ENSMUSG00000101997 ENSMUST00000187630 0.036±0.00 N/A N/A 0.019±0.01 N/A 0.091±0.00 N/A 0.038±0.00 0.016±0.01 0.047±0.00 0.044±0.01 0.119±0.07 0.014±0.01 N/A

Loading