C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activating transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409437 ATF2-011 ENSG00000115966 9606 - 2:175072265-175151082 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000409437
Transcript ID Ovary Placenta Testis
ENST00000409437 2.376±0.00 1.956±0.00 4.587±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HB CIL_0001HB_0001 CGP 2:174799363-175168382
CIL_0001H6 CIL_0001H6_0001 CGP 2:175072250-175184607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112016 Atf2-001 protein_coding Mus_musculus 0 2820
ENSMUST00000100009 Atf2-201 protein_coding Mus_musculus 0 2174
ENSMUST00000156455 Atf2-007 processed_transcript Mus_musculus 0 2174
ENSMUST00000112007 Atf2-002 protein_coding Mus_musculus 0 2174
ENSMUST00000055833 Atf2-005 protein_coding Mus_musculus 0 2174
ENSMUST00000090802 Atf2-006 protein_coding Mus_musculus 0 2174
ENSMUST00000112010 Atf2-008 protein_coding Mus_musculus 0 2174
ENSMUST00000112017 Atf2-202 protein_coding Mus_musculus 0 1775
ENSMUST00000124737 Atf2-015 protein_coding Mus_musculus 0 1358
ENSMUST00000136958 Atf2-013 protein_coding Mus_musculus 0 1103
ENSMUST00000143714 Atf2-004 processed_transcript Mus_musculus 0 782
ENSMUST00000173010 Atf2-017 nonsense_mediated_decay Mus_musculus 0 649
ENSMUST00000128531 Atf2-011 protein_coding Mus_musculus 0 647
ENSMUST00000141050 Atf2-003 processed_transcript Mus_musculus 0 647
ENSMUST00000125159 Atf2-009 processed_transcript Mus_musculus 0 233
ENSMUST00000138098 Atf2-010 processed_transcript Mus_musculus 3e-18 99
ENSMUST00000154456 Atf2-016 protein_coding Mus_musculus 3e-18 99

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