C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meis homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409517 MEIS1-013 ENSG00000143995 9606 + 2:66461798-66572454 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409517
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409517 0.519±0.00 2.229±0.00 1.159±0.08 1.504±0.00 9.132±0.00 2.554±0.00 2.737±0.00 0.525±0.00 3.120±0.00 0.869±0.00 1.221±0.00 2.366±1.18 3.875±2.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ET CIL_0008ET_0001 VISTA 2:65870410-66471811
CIL_00085V CIL_00085V_0001 VISTA 2:65983424-66584663
CIL_0007JR CIL_0007JR_0003 UCNEbase 2:66138106-68180953
CIL_0008VO CIL_0008VO_0001 VISTA 2:66222407-66823799
CIL_000949 CIL_000949_0001 VISTA 2:66235383-66837956
CIL_00094L CIL_00094L_0001 VISTA 2:66397571-66998983

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118661 Meis1-006 processed_transcript Mus_musculus 0 1716
ENSMUST00000068264 Meis1-001 protein_coding Mus_musculus 0 1716
ENSMUST00000185131 Meis1-201 protein_coding Mus_musculus 0 1210
ENSMUST00000177417 Meis1-008 protein_coding Mus_musculus 0 1210
ENSMUST00000102878 Meis1-004 nonsense_mediated_decay Mus_musculus 0 1210
ENSMUST00000144988 Meis1-005 protein_coding Mus_musculus 0 1210
ENSMUST00000177357 Meis1-007 nonsense_mediated_decay Mus_musculus 0 833
ENSMUST00000074285 Meis2-014 protein_coding Mus_musculus 0 459
ENSMUST00000110908 Meis2-013 protein_coding Mus_musculus 0 459
ENSMUST00000120995 Meis2-003 processed_transcript Mus_musculus 0 379
ENSMUST00000110906 Meis2-006 protein_coding Mus_musculus 0 372
ENSMUST00000110907 Meis2-001 protein_coding Mus_musculus 0 372
ENSMUST00000151279 Meis2-010 processed_transcript Mus_musculus 0 348
ENSMUST00000118654 Meis2-002 retained_intron Mus_musculus 0 228

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