C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meis homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118661 Meis1-006 ENSMUSG00000020160 10090 - 11:18880668-19012002 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118661
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118661 6.417±4.11 13.055±3.00 27.636±7.37 10.730±4.27 1.727±0.39 2.760±0.49 1.816±0.09 1.704±0.78 1.847±0.94 6.827±1.73 0.449±0.00 12.855±5.09 1.996±0.94 0.474±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JR CIL_0007JR_0004 UCNEbase 11:17198316-19679637
CIL_0007XO CIL_0007XO_0002 VISTA 11:18304266-18905268
CIL_00094L CIL_00094L_0002 VISTA 11:18449398-19050623
CIL_000949 CIL_000949_0002 VISTA 11:18616164-19218730
CIL_0008VO CIL_0008VO_0002 VISTA 11:18629400-19230770
CIL_00085V CIL_00085V_0002 VISTA 11:18859805-19461021

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102576 meis1-001 protein_coding Danio_rerio 0 710
ENSDART00000140215 meis1-002 retained_intron Danio_rerio 0 287
ENST00000272369 MEIS1-001 protein_coding Homo_sapiens 0 2409
ENST00000314177 MEIS2-012 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000340545 MEIS2-201 protein_coding Homo_sapiens 0 645
ENST00000397620 MEIS2-005 protein_coding Homo_sapiens 0 645
ENST00000397624 MEIS2-007 protein_coding Homo_sapiens 0 645
ENST00000398506 MEIS1-003 protein_coding Homo_sapiens 0 1210
ENST00000409517 MEIS1-013 processed_transcript Homo_sapiens 0 1716
ENST00000409622 MEIS1-010 processed_transcript Homo_sapiens 0 510
ENST00000424352 MEIS2-003 protein_coding Homo_sapiens 0 558
ENST00000437869 MEIS1-006 protein_coding Homo_sapiens 0 429
ENST00000450027 MEIS1-014 processed_transcript Homo_sapiens 0 601
ENST00000466811 MEIS1-011 processed_transcript Homo_sapiens 0 261
ENST00000475239 MEIS1-012 processed_transcript Homo_sapiens 0 652
ENST00000488550 MEIS1-002 protein_coding Homo_sapiens 0 1210
ENST00000491706 MEIS1-008 retained_intron Homo_sapiens 0 261
ENST00000495021 MEIS1-016 protein_coding Homo_sapiens 0 2409
ENST00000498705 MEIS1-007 retained_intron Homo_sapiens 0 693
ENST00000542964 MEIS1-015 processed_transcript Homo_sapiens 0 610
ENST00000557796 MEIS2-017 protein_coding Homo_sapiens 0 645
ENST00000557992 MEIS2-026 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000558643 MEIS2-022 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000559085 MEIS2-008 protein_coding Homo_sapiens 0 558
ENST00000559371 MEIS2-027 retained_intron Homo_sapiens 2.8026e-45 185
ENST00000559408 MEIS2-023 processed_transcript Homo_sapiens 4e-39 165
ENST00000559561 MEIS2-028 protein_coding Homo_sapiens 0 514
ENST00000560281 MEIS1-019 protein_coding Homo_sapiens 0 928
ENST00000560570 MEIS2-009 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000561264 MEIS2-024 retained_intron Homo_sapiens 0 272
ENST00000561284 MEIS2-025 retained_intron Homo_sapiens 0 344
ENST00000606455 MEIS1-018 processed_transcript Homo_sapiens 0 702

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