C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412567 RP11-389O22.5-001 ENSG00000236887 9606 + 1:113198825-113199258 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverLungMuscleOvaryTestisENST00000412567
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000412567 0.404±0.00 0.529±0.00 0.092±0.00 0.078±0.00 0.086±0.00 0.220±0.00 0.511±0.00 0.404±0.00 0.436±0.00 0.494±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000878 CIL_000878_0001 VISTA 1:112697401-113299438
CIL_0009BY CIL_0009BY_0001 VISTA 1:112697434-113299398

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068408 Rps15-001 protein_coding Mus_musculus 0 448
ENSMUST00000062674 Rps15-002 protein_coding Mus_musculus 0 444
ENSMUST00000121788 Rps15-ps2-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000161478 Gm6921-001 processed_pseudogene Mus_musculus 0 364
ENSDART00000104364 rps15-001 protein_coding Danio_rerio 0 348
ENSMUST00000118102 Gm8692-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000116114 Gm12947-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000169588 Gm4775-201 protein_coding Mus_musculus 0 228

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