C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12947
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116114 Gm12947-001 ENSMUSG00000079998 10090 - 4:127408379-127408798 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000116114
Transcript ID Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000116114 0.132±0.00 0.257±0.07 0.252±0.09 0.068±0.04 0.317±0.00 0.545±0.29 0.018±0.00 0.114±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233609 RPS15-006 protein_coding Homo_sapiens 0 394
ENST00000412567 RP11-389O22.5-001 processed_pseudogene Homo_sapiens 0 268
ENST00000433675 AC007969.5-001 processed_pseudogene Homo_sapiens 0 340
ENST00000449885 RPS15P5-001 processed_pseudogene Homo_sapiens 0 307
ENST00000585665 RPS15-010 protein_coding Homo_sapiens 0 370
ENST00000586096 RPS15-011 protein_coding Homo_sapiens 0 270
ENST00000586656 RPS15-005 protein_coding Homo_sapiens 3e-29 132
ENST00000586686 RPS15-009 protein_coding Homo_sapiens 0 289
ENST00000589656 RPS15-004 protein_coding Homo_sapiens 0 337
ENST00000591032 RPS15-008 protein_coding Homo_sapiens 0 289
ENST00000591804 RPS15-013 protein_coding Homo_sapiens 0 289
ENST00000592588 RPS15-001 protein_coding Homo_sapiens 0 398
ENST00000592623 RPS15-012 protein_coding Homo_sapiens 0 394
ENST00000592700 RPS15-003 retained_intron Homo_sapiens 0 289
ENST00000593052 RPS15-002 protein_coding Homo_sapiens 0 396

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