C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414293 RP11-182B22.2-001 ENSG00000226498 9606 + 1:236819634-236820518 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000414293
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000414293 0.019±0.00 0.119±0.00 0.355±0.00 0.062±0.04 0.351±0.29 0.190±0.13 0.207±0.08 0.020±0.00 0.154±0.14 0.047±0.03 0.077±0.03 0.040±0.00 0.135±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097Y CIL_00097Y_0001 VISTA 1:236338883-236940914
CIL_0008IY CIL_0008IY_0001 VISTA 1:236697312-237300217
CIL_0008J9 CIL_0008J9_0001 VISTA 1:236711218-237313545
CIL_0008J8 CIL_0008J8_0001 VISTA 1:236729167-237332656

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 228

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