C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415024 RP11-313E4.1-001 ENSG00000225947 9606 + 9:72470374-72471076 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000415024
Transcript ID Colon
ENST00000415024 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QU CIL_0007QU_0001 VISTA 9:72062282-72663099

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 0 309
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 0 309
ENSMUST00000119773 Rps12-ps19-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000117447 Rps12-ps10-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000139165 Rps12-ps9-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000179356 Rps12-ps14-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000178365 Rps12-ps13-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000179567 Rps12-ps15-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000179020 Rps12-ps12-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000178427 Rps12-ps11-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000118529 Rps12-ps16-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000179067 Rps12-ps17-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000179420 Rps12-ps18-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000179239 Rps12-ps6-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000121168 Rps12-ps20-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000118272 Rps12-ps5-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000179414 Rps12-ps23-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000179382 Rps12-ps22-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000178172 Rps12-ps21-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000121980 Rps12-ps1-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000175815 Gm20648-001 processed_pseudogene Mus_musculus 5e-32 141

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