C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latent transforming growth factor beta binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418533 LTBP1-201 ENSG00000049323 9606 + 2:33134597-33399506 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungMuscleOvaryENST00000418533
Transcript ID Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000418533 2.540±0.00 1.321±0.00 1.715±0.00 0.955±0.00 2.059±0.00 1.170±0.00 0.948±0.00 2.087±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TE CIL_0003TE_0002 CGP 2:32628032-33399509
CIL_0000MZ CIL_0000MZ_0001 CGP 2:32946972-33564750

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135447 Ltbp1-003 protein_coding Mus_musculus 0 3365
ENSMUST00000112516 Ltbp1-002 protein_coding Mus_musculus 0 3365
ENSMUST00000001927 Ltbp1-001 protein_coding Mus_musculus 0 3265
ENSMUST00000112514 Ltbp1-007 protein_coding Mus_musculus 0 1773
ENSMUST00000135750 Ltbp1-005 retained_intron Mus_musculus 0 893
ENSMUST00000127458 Ltbp1-004 retained_intron Mus_musculus 0 381
ENSDART00000079460 ltbp1-201 protein_coding Danio_rerio 4e-28 132
ENSDART00000155145 ltbp1-001 protein_coding Danio_rerio 4e-28 132

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