C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 49
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421336 HNRNPA1P49-001 ENSG00000233231 9606 + 6:166334568-166335471 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverOvaryTestisENST00000421336
Transcript ID Adipose Brain Breast Heart Kidney Liver Ovary Testis
ENST00000421336 0.198±0.00 0.128±0.00 0.306±0.09 0.070±0.00 0.146±0.05 0.147±0.00 0.230±0.17 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094V CIL_00094V_0001 VISTA 6:166171962-166774036

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 776
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 625
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 1.96182e-44 183
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 4.00001e-41 172

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