C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040649 AC165425.1-201 ENSMUSG00000101571 10090 - 9:123689230-123690192 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040649
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040649 1.030±0.71 0.220±0.00 0.286±0.10 1.068±0.00 0.350±0.20 0.387±0.20 0.552±0.23 0.824±0.42 1.635±1.56 1.406±0.28 0.283±0.11 0.868±0.83 0.211±0.11 0.297±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 0 756
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 0 856
ENST00000357495 HNRNPA1L2-001 protein_coding Homo_sapiens 0 1075
ENST00000394002 HNRNPA1P6-001 unprocessed_pseudogene Homo_sapiens 0 887
ENST00000397777 HNRNPA1P41-001 processed_pseudogene Homo_sapiens 0 481
ENST00000411735 HNRNPA1P46-001 processed_pseudogene Homo_sapiens 0 795
ENST00000411857 HNRNPA1P54-001 processed_pseudogene Homo_sapiens 0 656
ENST00000412087 HNRNPA1P27-001 processed_pseudogene Homo_sapiens 0 944
ENST00000420836 HNRNPA1P70-001 processed_pseudogene Homo_sapiens 0 610
ENST00000421336 HNRNPA1P49-001 processed_pseudogene Homo_sapiens 0 625
ENST00000421426 HNRNPA1P33-001 processed_pseudogene Homo_sapiens 0 595
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 0 959
ENST00000426371 HNRNPA1P40-001 processed_pseudogene Homo_sapiens 0 824
ENST00000426409 HNRNPA1P29-001 processed_pseudogene Homo_sapiens 0 462
ENST00000427917 HNRNPA1P63-001 processed_pseudogene Homo_sapiens 0 893
ENST00000429216 HNRNPA1P35-001 processed_pseudogene Homo_sapiens 0 1053
ENST00000430583 HNRNPA1P59-001 processed_pseudogene Homo_sapiens 0 580
ENST00000436090 HNRNPA1P8-001 processed_pseudogene Homo_sapiens 0 1016
ENST00000437295 HNRNPA1P22-001 processed_pseudogene Homo_sapiens 0 920
ENST00000440352 HNRNPA1P14-001 processed_pseudogene Homo_sapiens 0 773
ENST00000440547 HNRNPA1P39-001 processed_pseudogene Homo_sapiens 0 889
ENST00000440968 HNRNPA1P3-001 processed_pseudogene Homo_sapiens 0 436
ENST00000444886 HNRNPA1P15-001 processed_pseudogene Homo_sapiens 0 891
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 0 1085
ENST00000450405 HNRNPA1P51-001 processed_pseudogene Homo_sapiens 0 979
ENST00000452488 HNRNPA1P57-001 transcribed_processed_pseudogene Homo_sapiens 0 904
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 0 623
ENST00000453073 HNRNPA1P47-001 processed_pseudogene Homo_sapiens 0 387
ENST00000457695 HNRNPA1P26-001 processed_pseudogene Homo_sapiens 0 665
ENST00000484852 HNRNPA1P20-001 processed_pseudogene Homo_sapiens 0 857
ENST00000491091 HNRNPA1P23-001 processed_pseudogene Homo_sapiens 0 588
ENST00000496620 HNRNPA1P17-001 unprocessed_pseudogene Homo_sapiens 0 542
ENST00000505767 HNRNPA1P56-001 processed_pseudogene Homo_sapiens 0 939
ENST00000508873 HNRNPA1P65-001 processed_pseudogene Homo_sapiens 0 747
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 0 878
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 0 1014
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 0 1092
ENST00000521313 HNRNPA1P36-001 processed_pseudogene Homo_sapiens 0 918
ENST00000526810 HNRNPA1P60-001 processed_pseudogene Homo_sapiens 0 817
ENST00000529475 HNRNPA1P76-001 processed_pseudogene Homo_sapiens 0 235
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 0 1103
ENST00000546565 HNRNPA1P50-001 processed_pseudogene Homo_sapiens 0 830
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 0 710
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 0 1103
ENST00000547708 HNRNPA1-015 protein_coding Homo_sapiens 0 351
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 0 508
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 0 697
ENST00000550482 HNRNPA1-018 protein_coding Homo_sapiens 0 678
ENST00000550994 HNRNPA1-014 protein_coding Homo_sapiens 0 494
ENST00000551679 HNRNPA1-020 retained_intron Homo_sapiens 0 254
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 0 394
ENST00000559135 HNRNPA1P71-001 processed_pseudogene Homo_sapiens 0 774
ENST00000559372 HNRNPA1P62-001 processed_pseudogene Homo_sapiens 0 830
ENST00000560782 HNRNPA1P74-001 processed_pseudogene Homo_sapiens 0 590
ENST00000560893 HNRNPA1P45-001 processed_pseudogene Homo_sapiens 0 316
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 0 1092
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 0 1090
ENST00000570662 SRR-009 protein_coding Homo_sapiens 0 303
ENST00000575692 HNRNPA1P16-001 processed_pseudogene Homo_sapiens 0 972
ENST00000599047 HNRNPA1P52-001 processed_pseudogene Homo_sapiens 0 905

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