C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000421980  |
TAF6-003 |
ENSG00000106290 |
9606 | - |
7:100107070-100119359  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008QI | CIL_0008QI_0001 | VISTA | 7:99696610-100298804 |
| CIL_0003DY | CIL_0003DY_0001 | CGP | 7:100092728-100110345 |
| CIL_0005LK | CIL_0005LK_0001 | CGP | 7:100101549-100119841 |
| CIL_0005LJ | CIL_0005LJ_0001 | CGP | 7:100107070-100125511 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IEA | nucleus |
| GO:0006352 | IEA | DNA-templated transcription, initiation |
| GO:0046982 | IEA | protein heterodimerization activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000153117
|
Taf6-004 | nonsense_mediated_decay | Mus_musculus | 0 | 2302 |
|
ENSMUST00000110936
|
Taf6-001 | protein_coding | Mus_musculus | 0 | 1853 |
|
ENSMUST00000048698
|
Taf6-002 | protein_coding | Mus_musculus | 0 | 1853 |
|
ENSMUST00000110937
|
Taf6-005 | protein_coding | Mus_musculus | 0 | 1495 |
|
ENSMUST00000123415
|
Taf6-003 | protein_coding | Mus_musculus | 0 | 220 |
|
ENSMUST00000139276
|
Taf6-007 | protein_coding | Mus_musculus | 2e-18 | 99 |
