C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422457 RP11-175B9.3-001 ENSG00000236439 9606 - 1:202471864-202472117 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000422457
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000422457 0.483±0.00 1.334±0.00 0.188±0.11 1.183±0.57 0.347±0.00 0.132±0.00 0.744±0.00 1.394±1.33 0.139±0.00 0.635±0.00 4.860±7.44 0.251±0.00 0.399±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053150 Rps27rt-001 protein_coding Mus_musculus 0 407
ENSMUST00000170122 Rps27-201 protein_coding Mus_musculus 0 407
ENSMUST00000118062 Gm15531-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000173599 Gm19246-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000118179 Rps27-ps1-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000121307 Gm13009-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000119835 Gm14175-001 unprocessed_pseudogene Mus_musculus 0 285
ENSMUST00000121070 Gm11456-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000119164 Gm11572-001 processed_pseudogene Mus_musculus 5.60519e-45 183

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