C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422958 RP5-827C21.1-001 ENSG00000235605 9606 - 1:234356704-234357141 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryTestisENST00000422958
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000422958 0.075±0.00 0.333±0.00 0.287±0.00 0.087±0.00 0.244±0.00 0.288±0.00 0.285±0.00 0.900±0.00 0.123±0.00 0.236±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KC CIL_0006KC_0001 CGP 1:233904933-234384049
CIL_0007X4 CIL_0007X4_0001 VISTA 1:234243002-234844954

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068408 Rps15-001 protein_coding Mus_musculus 0 516
ENSMUST00000062674 Rps15-002 protein_coding Mus_musculus 0 512
ENSMUST00000121788 Rps15-ps2-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000118102 Gm8692-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000161478 Gm6921-001 processed_pseudogene Mus_musculus 0 405
ENSDART00000104364 rps15-001 protein_coding Danio_rerio 0 403
ENSMUST00000169588 Gm4775-201 protein_coding Mus_musculus 0 265

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