C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423216 RP3-423B22.5-001 ENSG00000237749 9606 + 1:37556247-37556499 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000423216
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000423216 2.064±0.00 2.705±0.00 0.313±0.00 1.325±0.72 1.273±0.03 0.325±0.00 0.291±0.00 0.317±0.06 2.033±0.00 1.191±0.00 16.484±21.27 0.265±0.03 0.578±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053150 Rps27rt-001 protein_coding Mus_musculus 0 396
ENSMUST00000170122 Rps27-201 protein_coding Mus_musculus 0 396
ENSMUST00000118062 Gm15531-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000173599 Gm19246-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000118179 Rps27-ps1-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000121307 Gm13009-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000119835 Gm14175-001 unprocessed_pseudogene Mus_musculus 0 272
ENSMUST00000119164 Gm11572-001 processed_pseudogene Mus_musculus 2.00386e-43 178

Loading