C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L18a pseudogene 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424057 RPL18AP16-001 ENSG00000237793 9606 + X:153662162-153662692 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverMuscleOvaryTestisENST00000424057
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Muscle Ovary Testis
ENST00000424057 0.336±0.00 0.356±0.00 0.131±0.00 0.179±0.00 0.195±0.00 0.111±0.00 0.837±0.00 0.210±0.00 0.169±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UZ CIL_0001UZ_0001 CGP X:153642492-153689010

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054220 Rpl18a-201 protein_coding Mus_musculus 0 542
ENSMUST00000117288 Gm15427-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000121555 Rpl18-ps1-001 processed_pseudogene Mus_musculus 0 521
ENSDART00000030215 rpl18a-001 protein_coding Danio_rerio 0 364
ENSDART00000148933 rpl18a-002 nonsense_mediated_decay Danio_rerio 0 287

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