C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L29, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161849 Rpl29-ps1-001 ENSMUSG00000090095 10090 - 3:152780774-152782061 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000161849
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000161849 0.135±0.07 0.201±0.01 0.076±0.01 0.023±0.00 0.277±0.11 0.245±0.05 0.140±0.05 0.117±0.07 0.276±0.08 0.275±0.13 0.034±0.02 0.148±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048N CIL_00048N_0002 CGP 3:152462815-152980408
CIL_00048M CIL_00048M_0002 CGP 3:152714100-152982246

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 231
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 204
ENST00000425197 RPL29P19-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 3e-40 169
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 9.94922e-44 180
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 220
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 8e-31 137
ENST00000451825 RP11-165N19.2-001 processed_pseudogene Homo_sapiens 3e-25 119
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 204
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 3e-30 135
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 7.00005e-41 171
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 231
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 231
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 226
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 231
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 1e-16 92
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 1e-16 92
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 8.00001e-41 171
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 7e-26 121
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.000000005 66
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 231
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 220
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 231
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 1e-24 117
ENST00000572281 CTD-2518G19.1-001 processed_pseudogene Homo_sapiens 9.80909e-45 183

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