C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L19 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432746 RPL19P12-001 ENSG00000224415 9606 - 7:103141349-103141939 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000432746
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000432746 0.443±0.00 0.228±0.00 0.249±0.06 0.418±0.11 0.423±0.20 0.059±0.00 0.373±0.00 0.089±0.00 0.825±0.42 0.513±0.00 1.024±0.74 0.729±0.00 0.633±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0001 VISTA 7:102540897-103142421
CIL_0005CI CIL_0005CI_0001 CGP 7:103074881-103149560
CIL_0005CJ CIL_0005CJ_0001 CGP 7:103099776-103329511

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121059 Rpl19-ps1-001 processed_pseudogene Mus_musculus 0 747
ENSMUST00000017548 Rpl19-001 protein_coding Mus_musculus 0 747
ENSMUST00000122422 Rpl19-ps11-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000092425 Rpl19-002 protein_coding Mus_musculus 0 741
ENSMUST00000159343 Gm16238-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000121251 Rpl19-ps12-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000120159 Gm6276-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000167150 Rpl19-ps4-201 processed_pseudogene Mus_musculus 0 580
ENSMUST00000121130 Gm15566-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000163015 Gm16558-001 processed_pseudogene Mus_musculus 0.0000000000006 79

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