C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing (lysine methyltransferase) 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437502 SETD8-005 ENSG00000183955 9606 + 12:123390042-123407568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleOvaryPlacentaTestisENST00000437502
Transcript ID Brain Heart Liver Muscle Ovary Placenta Testis
ENST00000437502 1.913±0.00 2.059±0.00 2.413±0.00 1.446±0.00 3.100±0.00 3.617±0.00 3.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000665 CIL_000665_0001 CGP 12:123289109-123409358
CIL_0003J0 CIL_0003J0_0001 CGP 12:123383773-123436717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0018024 IEA histone-lysine N-methyltransferase activity
GO:0034968 IEA histone lysine methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147969 Setd8-003 processed_transcript Mus_musculus 0 937
ENSMUST00000059580 Setd8-001 protein_coding Mus_musculus 0 937
ENSMUST00000100709 Setd8-002 protein_coding Mus_musculus 0 933
ENSMUST00000154031 Setd8-006 processed_transcript Mus_musculus 0 931
ENSMUST00000121113 Gm8770-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000138766 Setd8-005 processed_transcript Mus_musculus 0 590
ENSMUST00000121929 Gm11424-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000135667 Setd8-009 retained_intron Mus_musculus 0 564
ENSMUST00000125588 Setd8-010 retained_intron Mus_musculus 0 508
ENSMUST00000134826 Setd8-004 retained_intron Mus_musculus 0 435
ENSMUST00000143722 Setd8-008 processed_transcript Mus_musculus 0 403

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