C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing (lysine methyltransferase) 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437519 SETD8-002 ENSG00000183955 9606 + 12:123384166-123408507 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000437519
Transcript ID Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000437519 0.927±0.00 1.021±0.00 2.518±0.00 0.701±0.00 1.393±0.00 3.407±0.00 7.395±4.69 6.372±0.00 2.923±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000665 CIL_000665_0001 CGP 12:123289109-123409358
CIL_0003J0 CIL_0003J0_0001 CGP 12:123383773-123436717

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100709 Setd8-002 protein_coding Mus_musculus 0 1212
ENSMUST00000147969 Setd8-003 processed_transcript Mus_musculus 0 1210
ENSMUST00000059580 Setd8-001 protein_coding Mus_musculus 0 1210
ENSMUST00000154031 Setd8-006 processed_transcript Mus_musculus 0 1046
ENSMUST00000121113 Gm8770-001 processed_pseudogene Mus_musculus 0 889
ENSMUST00000125588 Setd8-010 retained_intron Mus_musculus 0 785
ENSMUST00000138766 Setd8-005 processed_transcript Mus_musculus 0 590
ENSMUST00000121929 Gm11424-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000135667 Setd8-009 retained_intron Mus_musculus 0 564
ENSMUST00000134826 Setd8-004 retained_intron Mus_musculus 0 431
ENSMUST00000143722 Setd8-008 processed_transcript Mus_musculus 0 403

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