C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | actinin, alpha 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000440400  |
ACTN4-004 |
ENSG00000130402 |
9606 | + |
19:38724157-38731583  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005509 | IEA | calcium ion binding |
| GO:0005515 | IEA | protein binding |
| GO:0051015 | IEA | actin filament binding |
| GO:0070830 | IEA | tight junction assembly |
| GO:1902396 | IEA | protein localization to tight junction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000144909
|
Actn4-002 | processed_transcript | Mus_musculus | 0 | 1317 |
|
ENSMUST00000068045
|
Actn4-001 | protein_coding | Mus_musculus | 0 | 1317 |
|
ENSMUST00000167327
|
Actn1-202 | protein_coding | Mus_musculus | 0 | 697 |
|
ENSMUST00000021554
|
Actn1-201 | protein_coding | Mus_musculus | 0 | 588 |
|
ENSDART00000123678
|
actn1-202 | protein_coding | Danio_rerio | 0 | 586 |
|
ENSDART00000001649
|
actn3b-001 | protein_coding | Danio_rerio | 0 | 532 |
|
ENSDART00000100217
|
actn1-201 | protein_coding | Danio_rerio | 0 | 510 |
|
ENSDART00000133740
|
actn1-002 | nonsense_mediated_decay | Danio_rerio | 0 | 510 |
|
ENSDART00000140243
|
actn1-001 | protein_coding | Danio_rerio | 0 | 510 |
|
ENSMUST00000143584
|
Actn4-007 | retained_intron | Mus_musculus | 0 | 460 |
|
ENSMUST00000129338
|
Actn4-008 | retained_intron | Mus_musculus | 0 | 385 |
|
ENSMUST00000066880
|
Capn12-201 | protein_coding | Mus_musculus | 0 | 300 |
