C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SVOP-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441685 SVOPL-002 ENSG00000157703 9606 - 7:138594285-138663571 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonOvaryTestisENST00000441685
Transcript ID Bladder Colon Ovary Testis
ENST00000441685 0.071±0.00 0.023±0.02 0.012±0.00 0.172±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Q3 CIL_0002Q3_0001 CGP 7:138460334-138701352
CIL_0002QA CIL_0002QA_0001 CGP 7:138594285-138799560

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096040 Svopl-001 protein_coding Mus_musculus 0 1179
ENSMUST00000172585 Svopl-002 nonsense_mediated_decay Mus_musculus 0 1046
ENSMUST00000040486 Svopl-004 retained_intron Mus_musculus 0 809

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