C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441945 ATP5C1P1-001 ENSG00000224004 9606 - 14:53991101-53991995 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverMuscleTestisENST00000441945
Transcript ID Adrenal Brain Breast Colon Kidney Liver Muscle Testis
ENST00000441945 0.029±0.00 0.015±0.00 0.029±0.00 0.027±0.00 0.117±0.00 0.013±0.00 0.025±0.00 0.086±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PK CIL_0008PK_0001 VISTA 14:53490522-54091438
CIL_0008PV CIL_0008PV_0001 VISTA 14:53513747-54115356
CIL_0008HY CIL_0008HY_0001 VISTA 14:53652860-54253781
CIL_0008KQ CIL_0008KQ_0001 VISTA 14:53920865-54521777
CIL_00090Z CIL_00090Z_0001 VISTA 14:53923660-54524764
CIL_0005GF CIL_0005GF_0001 CGP 14:53949736-54420218

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114897 Atp5c1-001 protein_coding Mus_musculus 0 867
ENSMUST00000026887 Atp5c1-002 protein_coding Mus_musculus 0 857
ENSMUST00000114896 Atp5c1-003 protein_coding Mus_musculus 0 839
ENSMUST00000145530 Atp5c1-005 protein_coding Mus_musculus 0 534
ENSMUST00000153554 Atp5c1-007 protein_coding Mus_musculus 0 496
ENSMUST00000139810 Atp5c1-004 protein_coding Mus_musculus 0 418
ENSMUST00000121271 Gm13263-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000130067 Atp5c1-006 protein_coding Mus_musculus 0 265

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