C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442896 SMARCE1P2-001 ENSG00000226309 9606 - 6:84429584-84430802 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENST00000442896
Transcript ID Brain Heart
ENST00000442896 0.012±0.00 0.018±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066X CIL_00066X_0001 CGP 6:84124241-84764519
CIL_0007K0 CIL_0007K0_0001 UCNEbase 6:84361462-85614404

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103133 Smarce1-001 protein_coding Mus_musculus 0 1323
ENSMUST00000180067 Gm1815-201 processed_pseudogene Mus_musculus 0 1099
ENSMUST00000155062 Smarce1-005 processed_transcript Mus_musculus 0 459
ENSMUST00000135040 Smarce1-003 processed_transcript Mus_musculus 0 278
ENSMUST00000128707 Smarce1-004 processed_transcript Mus_musculus 2.94273e-44 183

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