C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000155062  |
Smarce1-005 |
ENSMUSG00000037935 |
10090 | - |
11:99219220-99220831  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005QY | CIL_0005QY_0002 | CGP | 11:99144196-99231017 |
| CIL_0004QH | CIL_0004QH_0002 | CGP | 11:99209047-99244085 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000348513
|
SMARCE1-001 | protein_coding | Homo_sapiens | 0 | 610 |
|
ENST00000377808
|
SMARCE1-008 | protein_coding | Homo_sapiens | 0 | 608 |
|
ENST00000398372
|
SMARCE1P6-001 | processed_pseudogene | Homo_sapiens | 0 | 459 |
|
ENST00000400122
|
SMARCE1-015 | protein_coding | Homo_sapiens | 0 | 608 |
|
ENST00000412207
|
SMARCE1P5-001 | processed_pseudogene | Homo_sapiens | 0 | 518 |
|
ENST00000417747
|
SMARCE1P1-001 | processed_pseudogene | Homo_sapiens | 0 | 496 |
|
ENST00000431889
|
SMARCE1-012 | protein_coding | Homo_sapiens | 0 | 610 |
|
ENST00000442896
|
SMARCE1P2-001 | processed_pseudogene | Homo_sapiens | 0 | 459 |
|
ENST00000469334
|
SMARCE1-003 | retained_intron | Homo_sapiens | 0 | 610 |
|
ENST00000476049
|
KRT222-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 468 |
|
ENST00000478349
|
SMARCE1-018 | protein_coding | Homo_sapiens | 0 | 610 |
|
ENST00000481231
|
SMARCE1-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 538 |
|
ENST00000493660
|
SMARCE1-004 | retained_intron | Homo_sapiens | 0 | 608 |
|
ENST00000523647
|
SMARCE1P4-001 | processed_pseudogene | Homo_sapiens | 1e-25 | 119 |
|
ENST00000553649
|
SMARCE1P3-001 | processed_pseudogene | Homo_sapiens | 0 | 505 |
|
ENST00000577721
|
SMARCE1-017 | protein_coding | Homo_sapiens | 0 | 569 |
|
ENST00000578044
|
SMARCE1-014 | protein_coding | Homo_sapiens | 0 | 608 |
|
ENST00000578112
|
SMARCE1-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 610 |
|
ENST00000578995
|
SMARCE1-020 | retained_intron | Homo_sapiens | 0 | 704 |
|
ENST00000580419
|
SMARCE1-013 | protein_coding | Homo_sapiens | 0 | 608 |
|
ENST00000580654
|
SMARCE1-016 | protein_coding | Homo_sapiens | 0 | 571 |
|
ENST00000582955
|
SMARCE1-019 | protein_coding | Homo_sapiens | 0 | 385 |
|
ENST00000583294
|
SMARCE1-021 | retained_intron | Homo_sapiens | 0 | 300 |
