C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L36a pseudogene 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444514 RPL36AP15-001 ENSG00000235369 9606 - 2:47797826-47798091 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryTestisENST00000444514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000444514 0.051±0.00 0.526±0.00 4.145±0.00 0.827±0.00 0.437±0.18 5.372±0.00 0.404±0.25 1.400±1.35 1.667±0.71 1.654±2.20 0.090±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066I CIL_00066I_0001 CGP 2:47695530-47905793
CIL_00063U CIL_00063U_0001 CGP 2:47789316-48379294

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142299 Gm13194-001 processed_pseudogene Mus_musculus 3e-38 161
ENSMUST00000054544 Rpl36al-001 protein_coding Mus_musculus 2e-29 132
ENSMUST00000110619 Rpl36al-002 protein_coding Mus_musculus 2e-29 132
ENSMUST00000110620 Rpl36al-003 protein_coding Mus_musculus 2e-29 132
ENSMUST00000120093 Rpl36a-ps3-001 processed_pseudogene Mus_musculus 9e-28 126
ENSMUST00000121439 Gm12936-001 processed_pseudogene Mus_musculus 4e-26 121

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