C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Y box binding protein 1 pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444752 YBX1P10-001 ENSG00000213866 9606 - 9:35971344-35972318 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444752
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444752 0.296±0.00 0.194±0.00 0.037±0.00 0.141±0.00 0.293±0.00 0.136±0.07 0.146±0.00 0.161±0.00 0.041±0.00 0.159±0.07 1.302±0.00 0.201±0.07 0.176±0.12 0.789±0.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079644 Ybx1-001 protein_coding Mus_musculus 0 1452
ENSMUST00000117567 Gm11560-001 processed_pseudogene Mus_musculus 0 1249
ENSMUST00000127737 Ybx1-004 protein_coding Mus_musculus 0 918
ENSMUST00000119046 Gm15808-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000123576 E130201H02Rik-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000145976 Ybx1-007 processed_transcript Mus_musculus 0 357
ENSMUST00000142884 Ybx1-005 processed_transcript Mus_musculus 0 350
ENSMUST00000139897 Ybx1-003 processed_transcript Mus_musculus 0 350
ENSMUST00000152733 Ybx1-002 processed_transcript Mus_musculus 0 294
ENSMUST00000144992 Ybx1-006 processed_transcript Mus_musculus 7.9874e-44 182

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