C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 2, member D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444971 CLEC2D-017 ENSG00000069493 9606 + 12:9669717-9695817 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyOvaryPlacentaTestisENST00000444971
Transcript ID Adipose Bladder Breast Colon Heart Kidney Ovary Placenta Testis
ENST00000444971 0.394±0.00 0.995±0.00 2.092±0.00 2.104±0.00 0.419±0.00 0.331±0.00 1.772±0.00 0.548±0.15 1.515±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TA CIL_0000TA_0001 CGP 12:9594551-9699555

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109354 Npm1-002 protein_coding Mus_musculus 0 523
ENSMUST00000075641 Npm1-001 protein_coding Mus_musculus 0 523
ENSMUST00000101375 Npm1-003 protein_coding Mus_musculus 0 521
ENSMUST00000093201 Npm1-006 protein_coding Mus_musculus 0 520
ENSMUST00000118871 Gm15484-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000120677 Gm12583-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000164523 Gm5611-201 protein_coding Mus_musculus 0 348
ENSMUST00000117205 Gm13423-001 processed_pseudogene Mus_musculus 0 233

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