C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S4X pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446897 RPS4XP11-001 ENSG00000234335 9606 - 10:32102522-32103293 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000446897
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000446897 0.162±0.00 0.222±0.00 0.034±0.00 0.221±0.00 0.105±0.05 0.073±0.00 0.067±0.00 0.015±0.00 0.155±0.00 0.199±0.00 0.092±0.00 0.117±0.08 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XJ CIL_0000XJ_0002 CGP 10:32009010-32378798

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033683 Rps4x-001 protein_coding Mus_musculus 0 870
ENSMUST00000165198 Gm9294-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000119790 Gm13680-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000183728 Gm15013-002 protein_coding Mus_musculus 0 774
ENSMUST00000183537 Gm15013-001 translated_processed_pseudogene Mus_musculus 0 774
ENSMUST00000119478 Gm12852-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000187360 RP24-279G1.1-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000121609 Gm12267-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000155028 Rps4x-003 retained_intron Mus_musculus 0 483
ENSMUST00000119465 Gm12757-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000152739 Rps4x-002 retained_intron Mus_musculus 1e-36 158

Loading