C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S2 pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447334 RPS2P7-001 ENSG00000235508 9606 - 20:45640486-45641370 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000447334
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000447334 0.270±0.00 0.633±0.00 0.033±0.00 0.157±0.00 0.141±0.00 0.134±0.00 0.122±0.00 0.104±0.00 0.316±0.00 1.003±0.00 0.118±0.05 0.506±0.31 0.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002G CIL_00002G_0001 CGP 20:45629526-45670270

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 695
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 695
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000116032 Gm16073-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000119349 Gm11524-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000116022 Gm15846-001 processed_pseudogene Mus_musculus 0 316
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 0 239
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 5e-35 152

Loading