C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16073
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116032 Gm16073-001 ENSMUSG00000079915 10090 + 9:65838167-65838683 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116032
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116032 0.766±0.20 0.747±0.41 0.876±0.23 0.534±0.15 0.708±0.34 0.280±0.16 0.223±0.13 0.416±0.20 0.582±0.31 1.113±0.46 0.272±0.01 1.928±0.95 0.403±0.10 0.466±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H0 CIL_0008H0_0002 VISTA 9:65525988-66127110
CIL_0003WZ CIL_0003WZ_0002 CGP 9:65692391-65908794

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 377
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 442
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 363
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 442
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 403
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 396
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000439199 RPS2P32-001 processed_pseudogene Homo_sapiens 0 351
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 425
ENST00000447334 RPS2P7-001 processed_pseudogene Homo_sapiens 0 442
ENST00000448547 AC007279.2-001 processed_pseudogene Homo_sapiens 0 348
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 448
ENST00000458332 RPS2P46-001 processed_pseudogene Homo_sapiens 0 425
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000469610 RPS2P52-001 processed_pseudogene Homo_sapiens 0 324
ENST00000469884 RP11-6K23.1-001 processed_pseudogene Homo_sapiens 0 398
ENST00000469997 RPS2P45-002 processed_transcript Homo_sapiens 0 292
ENST00000476944 RPS2P4-001 processed_pseudogene Homo_sapiens 0 414
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 339
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 385
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 436
ENST00000486273 RP11-436M15.1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 451
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 351
ENST00000490535 RPS2P45-001 transcribed_processed_pseudogene Homo_sapiens 0 292
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 291
ENST00000493495 RPS2P41-001 processed_pseudogene Homo_sapiens 2e-23 113
ENST00000494359 RP11-452G18.2-001 processed_pseudogene Homo_sapiens 0 414
ENST00000494599 RPS2P24-001 processed_pseudogene Homo_sapiens 0 372
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 272
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 348
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 268
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 268
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 416
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 442
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 268
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 425
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 425
ENST00000534461 RPS2-014 retained_intron Homo_sapiens 9.99967e-42 174

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