C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S15 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449885 RPS15P5-001 ENSG00000229806 9606 + 3:54626215-54626646 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryTestisENST00000449885
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Testis
ENST00000449885 0.707±0.00 0.553±0.00 0.288±0.00 0.722±0.00 0.906±0.00 0.360±0.00 0.178±0.00 0.911±0.00 0.357±0.01 0.889±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001F9 CIL_0001F9_0002 CGP 3:54122547-55074557

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068408 Rps15-001 protein_coding Mus_musculus 0 490
ENSMUST00000062674 Rps15-002 protein_coding Mus_musculus 0 486
ENSMUST00000121788 Rps15-ps2-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000118102 Gm8692-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000161478 Gm6921-001 processed_pseudogene Mus_musculus 0 387
ENSDART00000104364 rps15-001 protein_coding Danio_rerio 0 364
ENSMUST00000116114 Gm12947-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000169588 Gm4775-201 protein_coding Mus_musculus 0 231

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