C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sarcoglycan, epsilon | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000450385  |
SGCE-007 |
ENSG00000127990 |
9606 | - |
7:94618804-94656127  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00082O | CIL_00082O_0001 | VISTA | 7:94046650-94649568 |
| CIL_0007XR | CIL_0007XR_0001 | VISTA | 7:94067785-94669696 |
| CIL_00095G | CIL_00095G_0001 | VISTA | 7:94074791-94676705 |
| CIL_0008ZR | CIL_0008ZR_0001 | VISTA | 7:94144032-94745602 |
| CIL_0004SP | CIL_0004SP_0002 | CGP | 7:94509219-94656209 |
| CIL_0006DZ | CIL_0006DZ_0001 | CGP | 7:94585230-94669695 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000153284
|
Sgce-002 | processed_transcript | Mus_musculus | 0 | 839 |
|
ENSMUST00000115577
|
Sgce-203 | protein_coding | Mus_musculus | 0 | 837 |
|
ENSMUST00000004750
|
Sgce-201 | protein_coding | Mus_musculus | 0 | 686 |
|
ENSMUST00000101677
|
Sgce-202 | protein_coding | Mus_musculus | 0 | 686 |
|
ENSMUST00000139029
|
Sgce-008 | processed_transcript | Mus_musculus | 0 | 686 |
|
ENSMUST00000128109
|
Sgce-006 | processed_transcript | Mus_musculus | 0 | 686 |
|
ENSMUST00000123907
|
Sgce-005 | protein_coding | Mus_musculus | 0 | 686 |
|
ENSMUST00000133306
|
Sgce-004 | protein_coding | Mus_musculus | 0 | 686 |
|
ENSMUST00000126151
|
Sgce-003 | protein_coding | Mus_musculus | 0 | 686 |
|
ENSMUST00000090686
|
Sgce-007 | protein_coding | Mus_musculus | 0 | 686 |
|
ENSMUST00000115579
|
Sgce-001 | protein_coding | Mus_musculus | 0 | 686 |
