C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sarcoglycan, epsilon | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000128109  |
Sgce-006 |
ENSMUSG00000004631 |
10090 | - |
6:4688612-4747080  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00082O | CIL_00082O_0002 | VISTA | 6:4156170-4759324 |
| CIL_0007XR | CIL_0007XR_0002 | VISTA | 6:4183463-4785322 |
| CIL_00095G | CIL_00095G_0002 | VISTA | 6:4188993-4790635 |
| CIL_0008ZR | CIL_0008ZR_0002 | VISTA | 6:4253537-4855066 |
| CIL_0004SP | CIL_0004SP_0003 | CGP | 6:4600840-4747204 |
| CIL_0006DZ | CIL_0006DZ_0002 | CGP | 6:4674350-4760517 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000265735
|
SGCE-001 | protein_coding | Homo_sapiens | 0 | 1572 |
|
ENST00000415788
|
SGCE-008 | protein_coding | Homo_sapiens | 0 | 1424 |
|
ENST00000425444
|
SGCE-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 470 |
|
ENST00000428696
|
SGCE-004 | protein_coding | Homo_sapiens | 0 | 1343 |
|
ENST00000437425
|
SGCE-002 | protein_coding | Homo_sapiens | 0 | 1275 |
|
ENST00000445866
|
SGCE-003 | protein_coding | Homo_sapiens | 0 | 1570 |
|
ENST00000447873
|
SGCE-005 | protein_coding | Homo_sapiens | 0 | 1343 |
|
ENST00000450385
|
SGCE-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 686 |
|
ENST00000462731
|
SGCE-009 | retained_intron | Homo_sapiens | 0 | 401 |
|
ENST00000472326
|
SGCE-010 | retained_intron | Homo_sapiens | 0 | 195 |
|
ENST00000522045
|
SGCE-011 | protein_coding | Homo_sapiens | 3e-39 | 165 |
