C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006DZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127990-ENSG00000242265 CGP 9606 7:94585230-94669695
GeneTranscriptPositionBiotype
ENSG00000127990 (SGCE)
sarcoglycan, epsilon 		ENST00000265735 (SGCE-001) 94585230-94656209 protein_coding
ENST00000415788 (SGCE-008) 94588311-94656186 protein_coding
ENST00000425444 (SGCE-006) 94623328-94656173 nonsense_mediated_decay
ENST00000428696 (SGCE-004) 94585412-94656098 protein_coding
ENST00000437425 (SGCE-002) 94585250-94656166 protein_coding
ENST00000445866 (SGCE-003) 94585248-94656124 protein_coding
ENST00000447873 (SGCE-005) 94585257-94656166 protein_coding
ENST00000450385 (SGCE-007) 94618804-94656127 nonsense_mediated_decay
ENST00000462731 (SGCE-009) 94600625-94603407 retained_intron
ENST00000472326 (SGCE-010) 94585470-94599137 retained_intron
ENST00000522045 (SGCE-011) 94585230-94600740 protein_coding
ENSG00000242265 (PEG10)
paternally expressed 10 		ENST00000465184 (PEG10-004) 94664735-94669180 processed_transcript
ENST00000482108 (PEG10-001) 94656325-94669695 protein_coding
ENST00000488574 (PEG10-002) 94656370-94665698 protein_coding
ENST00000493935 (PEG10-003) 94656370-94669637 processed_transcript
ENST00000612748 (PEG10-006) 94656370-94665698 protein_coding
ENST00000612941 (PEG10-008) 94656546-94669692 protein_coding
ENST00000613043 (PEG10-009) 94656384-94663650 protein_coding
ENST00000615790 (PEG10-007) 94656546-94669692 protein_coding
ENST00000617526 (PEG10-005) 94656546-94669692 protein_coding
CIL_0006DZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004631-ENSMUSG00000092035 CGP 10090 6:4674350-4760517
GeneTranscriptPositionBiotype
ENSMUSG00000004631 (Sgce)
sarcoglycan, epsilon 		ENSMUST00000004750 (Sgce-201) 4674352-4747204 protein_coding
ENSMUST00000090686 (Sgce-007) 4674384-4747157 protein_coding
ENSMUST00000101677 (Sgce-202) 4674352-4747204 protein_coding
ENSMUST00000115577 (Sgce-203) 4674352-4747204 protein_coding
ENSMUST00000115579 (Sgce-001) 4674350-4747204 protein_coding
ENSMUST00000123907 (Sgce-005) 4674508-4747037 protein_coding
ENSMUST00000126151 (Sgce-003) 4674418-4747019 protein_coding
ENSMUST00000128109 (Sgce-006) 4688612-4747080 processed_transcript
ENSMUST00000130428 (Sgce-009) 4677931-4689699 processed_transcript
ENSMUST00000133306 (Sgce-004) 4674418-4747019 protein_coding
ENSMUST00000139029 (Sgce-008) 4691600-4747063 processed_transcript
ENSMUST00000153284 (Sgce-002) 4674360-4730126 processed_transcript
ENSMUSG00000092035 (Peg10)
paternally expressed 10 		ENSMUST00000166678 (Peg10-201) 4747306-4760514 protein_coding
ENSMUST00000175823 (Peg10-002) 4747306-4755327 protein_coding
ENSMUST00000176204 (Peg10-001) 4747306-4760517 protein_coding
ENSMUST00000176551 (Peg10-003) 4755327-4760517 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DZ_0001ENSG00000127990ENST00000265735ENST00000415788ENST00000425444ENST00000428696ENST00000437425ENST00000445866ENST00000447873ENST00000450385ENST00000462731ENST00000472326ENST00000522045ENSG00000242265ENST00000465184ENST00000482108ENST00000488574ENST00000493935ENST00000612748ENST00000612941ENST00000613043ENST00000615790ENST00000617526CIL_0006DZ_0002ENSMUSG00000004631ENSMUST00000004750ENSMUST00000090686ENSMUST00000101677ENSMUST00000115577ENSMUST00000115579ENSMUST00000123907ENSMUST00000126151ENSMUST00000128109ENSMUST00000130428ENSMUST00000133306ENSMUST00000139029ENSMUST00000153284ENSMUSG00000092035ENSMUST00000166678ENSMUST00000175823ENSMUST00000176204ENSMUST00000176551
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DZ_0001ENSG00000127990ENST00000265735ENST00000415788ENST00000428696ENST00000437425ENST00000445866ENST00000447873ENST00000462731ENST00000472326ENSG00000242265ENST00000465184ENST00000482108ENST00000488574ENST00000493935ENST00000612941CIL_0006DZ_0002ENSMUSG00000004631ENSMUST00000004750ENSMUST00000090686ENSMUST00000101677ENSMUST00000115577ENSMUST00000115579ENSMUST00000123907ENSMUST00000130428ENSMUST00000133306ENSMUST00000153284ENSMUSG00000092035ENSMUST00000166678ENSMUST00000175823ENSMUST00000176204ENSMUST00000176551
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127990 ENST00000265735 7.749±0.00 4.497±0.00 2.234±0.00 2.778±0.64 4.120±1.22 10.528±9.01 1.373±0.53 2.328±1.01 3.018±0.90 6.061±0.03 1.056±0.00 23.803±12.62 15.115±0.77 16.642±0.00
ENST00000415788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.745±0.00 N/A N/A
ENST00000425444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428696 N/A N/A N/A 4.056±0.50 2.713±0.00 0.422±0.00 1.777±0.00 4.000±0.00 N/A 5.787±0.00 0.948±0.00 N/A N/A N/A
ENST00000437425 3.052±0.00 7.291±0.00 N/A 5.059±0.00 5.452±0.00 15.707±0.00 2.847±0.00 6.091±0.00 2.023±0.00 9.136±0.00 0.275±0.00 10.787±10.06 7.897±0.63 4.792±0.00
ENST00000445866 N/A N/A N/A N/A 2.106±0.00 N/A 1.740±0.00 1.051±0.00 2.586±1.09 N/A 0.934±0.00 N/A N/A N/A
ENST00000447873 2.886±0.00 4.014±0.00 N/A N/A 2.589±0.00 0.653±0.00 N/A N/A N/A N/A N/A 5.465±0.00 5.450±1.66 6.400±0.00
ENST00000450385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.646±0.00 27.264±0.00 12.954±0.00
ENST00000472326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.518±0.00 N/A 9.619±0.00
ENST00000522045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242265 ENST00000465184 N/A 1.703±0.00 N/A 31.246±0.00 8.425±0.00 7.917±0.00 N/A 3.741±0.00 0.323±0.00 N/A N/A 55.130±29.19 1133.820±0.00 61.095±34.67
ENST00000482108 N/A N/A N/A 8.533±4.78 1.369±0.00 0.374±0.00 N/A N/A 2.780±0.00 0.855±0.27 0.614±0.00 8.042±0.55 125.028±0.00 8.685±0.00
ENST00000488574 N/A N/A 0.604±0.00 N/A N/A 0.310±0.00 0.086±0.00 N/A 1.251±0.00 N/A 0.277±0.00 N/A N/A N/A
ENST00000493935 N/A N/A N/A N/A N/A N/A N/A N/A 0.378±0.00 5.888±0.00 N/A 41.128±14.63 N/A 59.512±0.00
ENST00000612748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612941 0.783±0.00 1.049±0.00 1.061±0.00 8.824±1.31 4.068±0.48 3.207±2.94 0.240±0.09 1.535±0.55 0.758±0.51 2.906±0.25 0.145±0.00 15.129±5.15 159.702±39.31 13.998±6.66
ENST00000613043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004631 ENSMUST00000004750 N/A N/A N/A 0.722±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000090686 4.353±0.00 2.238±0.68 N/A 6.651±0.27 2.136±0.47 0.916±0.24 1.277±0.00 0.619±0.15 0.298±0.19 N/A 0.441±0.15 3.700±0.71 6.356±2.43 0.657±0.41
ENSMUST00000101677 N/A 2.520±0.61 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.629±0.00
ENSMUST00000115577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.361±0.05 N/A N/A N/A
ENSMUST00000115579 24.088±7.49 8.541±1.71 32.977±0.52 3.510±0.21 11.874±1.29 4.369±0.91 5.949±0.58 3.620±0.79 5.260±4.53 18.994±2.27 2.020±0.48 17.489±3.28 21.282±16.33 2.259±0.65
ENSMUST00000123907 N/A N/A N/A 1.425±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.986±0.70 N/A
ENSMUST00000126151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.413±0.00 N/A N/A
ENSMUST00000133306 N/A 3.494±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.700±0.61 5.529±1.01 0.554±0.00
ENSMUST00000139029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153284 N/A N/A N/A N/A 6.683±0.00 1.396±0.00 N/A 1.956±0.00 1.828±0.00 N/A 0.727±0.27 13.661±0.00 17.451±9.90 N/A
ENSMUSG00000092035 ENSMUST00000166678 1.019±0.08 44.424±8.55 0.944±0.08 16.730±7.10 0.405±0.03 0.146±0.07 0.084±0.00 0.077±0.07 3.308±2.22 0.456±0.09 0.052±0.03 N/A 278.619±206.86 N/A
ENSMUST00000175823 N/A N/A N/A N/A N/A 0.183±0.00 N/A 0.160±0.00 0.053±0.02 N/A 0.177±0.06 40.710±0.00 1872.315±653.84 6.022±0.00
ENSMUST00000176204 N/A N/A 0.572±0.29 5.420±0.00 N/A 0.127±0.05 0.031±0.00 0.046±0.02 1.431±0.81 N/A 0.050±0.03 N/A 90.099±29.60 N/A
ENSMUST00000176551 1.703±0.93 39.504±13.25 1.711±0.25 11.106±6.68 1.557±0.65 0.313±0.13 0.280±0.07 0.135±0.07 4.202±4.58 0.445±0.23 0.171±0.11 13.162±5.27 624.471±440.13 5.705±2.67

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