C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 47
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453073 HNRNPA1P47-001 ENSG00000236695 9606 + 2:194187379-194188309 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000453073
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000453073 0.013±0.00 0.082±0.00 0.041±0.00 0.040±0.00 0.075±0.00 0.013±0.00 0.014±0.00 0.012±0.00 0.013±0.00 0.012±0.00 0.027±0.01 0.020±0.00 0.071±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 499
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 499
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 494
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 387
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 211
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000118156 Gm15240-001 processed_pseudogene Mus_musculus 1e-16 92
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 315

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