C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13297
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120205 Gm13297-001 ENSMUSG00000081693 10090 + 2:11090879-11091764 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastENSMUST00000120205
Transcript ID Brain Breast
ENSMUST00000120205 0.023±0.01 0.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QF CIL_0000QF_0002 CGP 2:10370510-11301226

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 0 479
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 0 564
ENST00000342073 HNRNPA1P61-001 processed_pseudogene Homo_sapiens 0 527
ENST00000357495 HNRNPA1L2-001 protein_coding Homo_sapiens 0 743
ENST00000391992 HNRNPA1P34-001 processed_pseudogene Homo_sapiens 0 588
ENST00000397777 HNRNPA1P41-001 processed_pseudogene Homo_sapiens 0 307
ENST00000401954 HNRNPA1P1-001 processed_pseudogene Homo_sapiens 0 459
ENST00000421426 HNRNPA1P33-001 processed_pseudogene Homo_sapiens 0 451
ENST00000422644 HNRNPA1P25-001 processed_pseudogene Homo_sapiens 0 429
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 0 612
ENST00000426371 HNRNPA1P40-001 processed_pseudogene Homo_sapiens 0 588
ENST00000427917 HNRNPA1P63-001 processed_pseudogene Homo_sapiens 0 575
ENST00000429216 HNRNPA1P35-001 processed_pseudogene Homo_sapiens 0 743
ENST00000430583 HNRNPA1P59-001 processed_pseudogene Homo_sapiens 0 244
ENST00000436090 HNRNPA1P8-001 processed_pseudogene Homo_sapiens 0 695
ENST00000437295 HNRNPA1P22-001 processed_pseudogene Homo_sapiens 0 595
ENST00000440352 HNRNPA1P14-001 processed_pseudogene Homo_sapiens 0 549
ENST00000440547 HNRNPA1P39-001 processed_pseudogene Homo_sapiens 0 617
ENST00000440699 HNRNPA1P30-001 transcribed_processed_pseudogene Homo_sapiens 0 527
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 0 769
ENST00000450405 HNRNPA1P51-001 processed_pseudogene Homo_sapiens 0 652
ENST00000452488 HNRNPA1P57-001 transcribed_processed_pseudogene Homo_sapiens 0 617
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 0 226
ENST00000453073 HNRNPA1P47-001 processed_pseudogene Homo_sapiens 0 315
ENST00000457695 HNRNPA1P26-001 processed_pseudogene Homo_sapiens 0 381
ENST00000484852 HNRNPA1P20-001 processed_pseudogene Homo_sapiens 0 577
ENST00000491091 HNRNPA1P23-001 processed_pseudogene Homo_sapiens 0 350
ENST00000505767 HNRNPA1P56-001 processed_pseudogene Homo_sapiens 0 617
ENST00000505935 HNRNPA1P55-001 processed_pseudogene Homo_sapiens 0 654
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 0 688
ENST00000510646 HNRNPA1P13-001 processed_pseudogene Homo_sapiens 0 592
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 0 667
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 0 760
ENST00000521313 HNRNPA1P36-001 processed_pseudogene Homo_sapiens 0 608
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 0 771
ENST00000546565 HNRNPA1P50-001 processed_pseudogene Homo_sapiens 0 564
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 0 433
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 0 771
ENST00000547708 HNRNPA1-015 protein_coding Homo_sapiens 5.00264e-43 178
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 0 337
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 0 448
ENST00000550482 HNRNPA1-018 protein_coding Homo_sapiens 0 551
ENST00000550994 HNRNPA1-014 protein_coding Homo_sapiens 0 307
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 0 318
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 0 754
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 0 754
ENST00000570662 SRR-009 protein_coding Homo_sapiens 0 257
ENST00000575692 HNRNPA1P16-001 processed_pseudogene Homo_sapiens 0 640
ENST00000580106 HNRNPA1P11-001 processed_pseudogene Homo_sapiens 0 551
ENST00000599047 HNRNPA1P52-001 processed_pseudogene Homo_sapiens 0 634
ENST00000604027 HNRNPA1P67-001 processed_pseudogene Homo_sapiens 0 556

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