C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454791 RHBDD2-006 ENSG00000005486 9606 + 7:75879004-75888884 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000454791
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000454791 7.305±0.00 0.355±0.00 6.078±0.00 2.747±0.00 2.462±0.00 15.255±0.00 6.795±0.00 11.581±0.00 10.262±0.00 7.505±0.60 15.777±5.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NQ CIL_0006NQ_0001 CGP 7:75811665-75888926
CIL_0006NP CIL_0006NP_0001 CGP 7:75842602-75986855

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136748 Rhbdd2-002 nonsense_mediated_decay Mus_musculus 0 1249
ENSMUST00000043707 Rhbdd2-001 protein_coding Mus_musculus 0 931
ENSMUST00000084599 Rhbdd2-003 retained_intron Mus_musculus 0 479

Loading