C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136748 Rhbdd2-002 ENSMUSG00000039917 10090 + 5:135632654-135646448 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastOvaryTestisENSMUST00000136748
Transcript ID Adipose Brain Breast Ovary Testis
ENSMUST00000136748 1.634±0.00 2.082±0.43 1.604±0.00 1.458±0.00 5.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NQ CIL_0006NQ_0002 CGP 5:135569937-135646448
CIL_0006NP CIL_0006NP_0002 CGP 5:135632618-135735326

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0003674 ND molecular_function
GO:0005794 IDA Golgi apparatus
GO:0008150 ND biological_process
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000006777 RHBDD2-001 protein_coding Homo_sapiens 0 931
ENST00000318622 RHBDD2-201 protein_coding Homo_sapiens 0 1253
ENST00000428119 RHBDD2-002 protein_coding Homo_sapiens 0 652
ENST00000454791 RHBDD2-006 nonsense_mediated_decay Homo_sapiens 0 1249
ENST00000467406 RHBDD2-009 processed_transcript Homo_sapiens 0 399
ENST00000468304 RHBDD2-005 processed_transcript Homo_sapiens 0 315
ENST00000613112 RHBDD2-202 protein_coding Homo_sapiens 0 917
ENST00000614848 RHBDD2-203 protein_coding Homo_sapiens 0 917

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