C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455497 RP11-360D2.2-001 ENSG00000225591 9606 + 1:173741674-173741928 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000455497
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000455497 0.121±0.00 0.706±0.00 0.616±0.28 0.240±0.11 0.294±0.00 0.169±0.00 0.186±0.00 0.716±0.00 1.158±0.00 1.033±0.00 7.630±7.49 0.173±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WG CIL_0001WG_0002 CGP 1:173714941-173824720

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053150 Rps27rt-001 protein_coding Mus_musculus 0 364
ENSMUST00000170122 Rps27-201 protein_coding Mus_musculus 0 363
ENSMUST00000118062 Gm15531-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000173599 Gm19246-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000118179 Rps27-ps1-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000121307 Gm13009-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000119835 Gm14175-001 unprocessed_pseudogene Mus_musculus 0 259
ENSMUST00000119164 Gm11572-001 processed_pseudogene Mus_musculus 5e-40 167

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