C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456046 AC079250.1-001 ENSG00000230979 9606 - 2:47690716-47691246 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000456046
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000456046 0.544±0.00 0.523±0.00 0.192±0.00 0.464±0.00 0.056±0.00 0.064±0.00 0.413±0.30 0.658±0.00 0.573±0.00 0.646±0.19 0.472±0.33 0.119±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054220 Rpl18a-201 protein_coding Mus_musculus 0 610
ENSMUST00000117288 Gm15427-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000121555 Rpl18-ps1-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000161190 Rpl18a-ps1-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000080062 Gm17541-201 protein_coding Mus_musculus 0 501
ENSDART00000030215 rpl18a-001 protein_coding Danio_rerio 0 375
ENSMUST00000172625 Gm18128-001 processed_pseudogene Mus_musculus 0 287
ENSDART00000148933 rpl18a-002 nonsense_mediated_decay Danio_rerio 0 279
ENSMUST00000178437 Gm9002-001 processed_pseudogene Mus_musculus 0 211

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