C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457554 RP11-761N21.2-001 ENSG00000234287 9606 + 3:40761545-40761799 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyMuscleOvaryENST00000457554
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Muscle Ovary
ENST00000457554 0.132±0.00 0.282±0.00 0.301±0.00 0.338±0.00 0.195±0.00 0.141±0.00 0.244±0.18 30.289±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053150 Rps27rt-001 protein_coding Mus_musculus 0 418
ENSMUST00000170122 Rps27-201 protein_coding Mus_musculus 0 418
ENSMUST00000118062 Gm15531-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000173599 Gm19246-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000118179 Rps27-ps1-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000121307 Gm13009-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000119835 Gm14175-001 unprocessed_pseudogene Mus_musculus 0 289
ENSMUST00000121070 Gm11456-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000119164 Gm11572-001 processed_pseudogene Mus_musculus 5.60519e-45 183

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