C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: syntaxin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457779 STX4-005 ENSG00000103496 9606 + 16:31032889-31035032 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryENST00000457779
Transcript ID Heart Ovary
ENST00000457779 0.472±0.00 1.833±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XW CIL_0001XW_0001 CGP 16:30989256-31042975
CIL_0001UH CIL_0001UH_0001 CGP 16:31032889-31074320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138399 Stx4a-005 retained_intron Mus_musculus 0 385
ENSMUST00000121705 Stx4a-002 protein_coding Mus_musculus 0 385
ENSMUST00000033075 Stx4a-001 protein_coding Mus_musculus 0 385
ENSMUST00000156537 Stx4a-004 nonsense_mediated_decay Mus_musculus 0 311
ENSMUST00000152310 Stx4a-003 processed_transcript Mus_musculus 1e-39 167
ENSMUST00000138294 Stx4a-006 retained_intron Mus_musculus 4e-39 165

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