C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001XW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099365-ENSG00000103496 CGP 9606 16:30989256-31042975
GeneTranscriptPositionBiotype
ENSG00000099365 (STX1B)
syntaxin 1B 		ENST00000215095 (STX1B-001) 30989256-31010628 protein_coding
ENST00000561836 (STX1B-004) 31000896-31010502 retained_intron
ENST00000565419 (STX1B-003) 30992708-31010396 protein_coding
ENST00000566211 (STX1B-005) 30996199-30997044 retained_intron
ENST00000569638 (STX1B-002) 30989258-31000955 protein_coding
ENSG00000103496 (STX4)
syntaxin 4 		ENST00000313843 (STX4-001) 31033491-31040168 protein_coding
ENST00000394998 (STX4-003) 31033095-31040163 protein_coding
ENST00000457779 (STX4-005) 31032889-31035032 protein_coding
ENST00000460668 (STX4-009) 31033547-31038187 nonsense_mediated_decay
ENST00000461455 (STX4-007) 31033588-31034877 retained_intron
ENST00000468583 (STX4-012) 31038619-31040168 retained_intron
ENST00000475862 (STX4-011) 31038601-31040168 retained_intron
ENST00000478150 (STX4-008) 31033786-31034507 retained_intron
ENST00000486660 (STX4-010) 31038510-31040012 retained_intron
ENST00000487411 (STX4-004) 31033546-31039803 retained_intron
ENST00000493902 (STX4-002) 31033095-31040129 processed_transcript
ENST00000496977 (STX4-006) 31033547-31038647 nonsense_mediated_decay
ENST00000503629 (STX4-016) 31039080-31042975 processed_transcript
ENST00000564368 (STX4-017) 31039320-31040147 processed_transcript
ENST00000565483 (STX4-014) 31033606-31034853 retained_intron
ENST00000566353 (STX4-013) 31033557-31034518 retained_intron
ENST00000613541 (STX4-018) 31033805-31034877 protein_coding
CIL_0001XW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030806-ENSMUSG00000030805 CGP 10090 7:127803900-127849019
GeneTranscriptPositionBiotype
ENSMUSG00000030805 (Stx4a)
syntaxin 4A (placental) 		ENSMUST00000033075 (Stx4a-001) 127841764-127849019 protein_coding
ENSMUST00000121705 (Stx4a-002) 127841968-127849019 protein_coding
ENSMUST00000123180 (Stx4a-007) 127845784-127848498 retained_intron
ENSMUST00000125861 (Stx4a-009) 127848391-127849019 retained_intron
ENSMUST00000138294 (Stx4a-006) 127842685-127846586 retained_intron
ENSMUST00000138399 (Stx4a-005) 127841970-127843944 retained_intron
ENSMUST00000142849 (Stx4a-008) 127843598-127848677 retained_intron
ENSMUST00000152310 (Stx4a-003) 127824294-127849019 processed_transcript
ENSMUST00000156537 (Stx4a-004) 127841978-127846618 nonsense_mediated_decay
ENSMUSG00000030806 (Stx1b)
syntaxin 1B 		ENSMUST00000106267 (Stx1b-001) 127803900-127824549 protein_coding
ENSMUST00000156135 (Stx1b-002) 127807372-127810924 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XW_0001ENSG00000099365ENST00000215095ENST00000561836ENST00000565419ENST00000566211ENST00000569638ENSG00000103496ENST00000313843ENST00000394998ENST00000457779ENST00000460668ENST00000461455ENST00000468583ENST00000475862ENST00000478150ENST00000486660ENST00000487411ENST00000493902ENST00000496977ENST00000503629ENST00000564368ENST00000565483ENST00000566353ENST00000613541CIL_0001XW_0002ENSMUSG00000030805ENSMUST00000033075ENSMUST00000121705ENSMUST00000123180ENSMUST00000125861ENSMUST00000138294ENSMUST00000138399ENSMUST00000142849ENSMUST00000152310ENSMUST00000156537ENSMUSG00000030806ENSMUST00000106267ENSMUST00000156135
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XW_0001ENSG00000099365ENST00000215095ENST00000561836ENST00000565419ENST00000566211ENST00000569638ENSG00000103496ENST00000313843ENST00000394998ENST00000457779ENST00000460668ENST00000468583ENST00000475862ENST00000486660ENST00000487411ENST00000496977ENST00000503629ENST00000613541CIL_0001XW_0002ENSMUSG00000030805ENSMUST00000033075ENSMUST00000121705ENSMUST00000125861ENSMUST00000142849ENSMUST00000156537ENSMUSG00000030806ENSMUST00000106267ENSMUST00000156135
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099365 ENST00000215095 N/A N/A N/A 62.400±0.00 N/A 0.132±0.00 N/A N/A N/A N/A N/A 0.426±0.00 N/A 1.058±0.24
ENST00000561836 N/A N/A N/A 6.588±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A
ENST00000565419 N/A N/A N/A 3.178±0.00 N/A 0.031±0.00 N/A N/A N/A N/A N/A 0.478±0.43 0.106±0.00 4.870±0.00
ENST00000566211 N/A N/A 0.184±0.00 N/A N/A N/A N/A 0.721±0.00 N/A N/A N/A N/A 0.135±0.00 N/A
ENST00000569638 0.554±0.00 1.801±0.00 0.094±0.00 5.231±0.00 0.481±0.33 0.456±0.00 0.182±0.00 0.296±0.18 0.628±0.00 0.176±0.00 0.132±0.00 0.461±0.24 0.063±0.02 1.133±0.00
ENSG00000103496 ENST00000313843 36.832±0.00 35.534±0.00 1.244±0.00 17.412±0.00 12.012±11.14 20.875±19.41 7.433±6.76 26.588±0.00 7.509±5.09 21.505±19.23 17.988±0.00 19.478±13.69 29.363±5.75 15.236±10.60
ENST00000394998 N/A N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A N/A N/A N/A N/A N/A
ENST00000457779 N/A N/A N/A N/A N/A N/A 0.472±0.00 N/A N/A N/A N/A 1.833±0.00 N/A N/A
ENST00000460668 N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000461455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468583 N/A N/A 1.164±0.00 N/A 2.814±0.00 N/A N/A N/A N/A N/A 2.084±0.00 N/A N/A N/A
ENST00000475862 N/A N/A N/A 3.569±0.00 2.404±0.00 N/A N/A N/A N/A N/A 1.096±0.00 N/A N/A N/A
ENST00000478150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 73.411±0.00 63.446±0.00 32.588±0.00
ENST00000487411 8.295±0.00 14.594±0.00 N/A N/A 10.706±0.00 N/A N/A N/A N/A 6.281±5.36 2.007±0.00 12.845±3.40 N/A 3.910±0.00
ENST00000493902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.122±0.00
ENST00000503629 N/A N/A N/A 1.729±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613541 N/A N/A N/A N/A N/A N/A N/A 1.733±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030805 ENSMUST00000033075 23.300±1.66 12.029±3.30 33.891±3.94 N/A 18.995±0.35 17.467±4.57 22.622±1.60 16.589±2.25 14.273±3.24 20.607±1.38 23.222±2.91 14.614±3.78 26.331±4.51 4.025±1.50
ENSMUST00000121705 13.841±1.06 13.313±2.69 18.431±3.98 N/A 12.666±0.80 10.992±1.87 9.284±2.59 5.956±1.48 7.742±1.92 12.964±1.04 8.947±1.31 15.494±3.59 18.429±7.10 2.814±0.45
ENSMUST00000123180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125861 N/A 20.856±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142849 N/A N/A 27.638±7.39 N/A N/A N/A N/A N/A N/A N/A N/A 33.720±12.38 46.247±13.21 7.873±0.00
ENSMUST00000152310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.010±0.00 N/A 3.538±0.00
ENSMUSG00000030806 ENSMUST00000106267 6.589±3.76 4.428±1.55 1.922±0.00 64.868±45.21 6.603±2.63 2.268±0.43 1.256±0.19 1.081±0.08 2.300±1.02 1.419±0.00 N/A 2.959±1.28 2.823±1.29 0.697±0.35
ENSMUST00000156135 N/A N/A N/A 549.561±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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