C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: syntaxin 4A (placental)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138399 Stx4a-005 ENSMUSG00000030805 10090 + 7:127841970-127843944 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001X8 CIL_0001X8_0002 CGP 7:127785608-127824549
CIL_0001XW CIL_0001XW_0002 CGP 7:127803900-127849019
CIL_0001UH CIL_0001UH_0002 CGP 7:127824294-127876828

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313843 STX4-001 protein_coding Homo_sapiens 0 436
ENST00000394998 STX4-003 protein_coding Homo_sapiens 0 320
ENST00000457779 STX4-005 protein_coding Homo_sapiens 0 385
ENST00000460668 STX4-009 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000461455 STX4-007 retained_intron Homo_sapiens 0 263
ENST00000478150 STX4-008 retained_intron Homo_sapiens 2e-33 147
ENST00000487411 STX4-004 retained_intron Homo_sapiens 0 263
ENST00000493902 STX4-002 processed_transcript Homo_sapiens 0 401
ENST00000496977 STX4-006 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000565483 STX4-014 retained_intron Homo_sapiens 0 244
ENST00000566353 STX4-013 retained_intron Homo_sapiens 2e-39 167
ENST00000613541 STX4-018 protein_coding Homo_sapiens 0 339

Loading